BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013G01SP1|AL426571
(825 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1679 1239 0.0
>3x_Contig1679
Length = 11609
Score = 1239 bits (625), Expect = 0.0
Identities = 650/657 (98%), Gaps = 1/657 (0%)
Strand = Plus / Minus
Query: 170 atatatatttatacgagtataaggatgatagagcttaa-tacttgtcaaaaggagaagtt 228
||||||||||||||||||||||| || ||| | ||||| |||||||||||||||||||||
Sbjct: 11605 atatatatttatacgagtataagcatcatacaccttaaatacttgtcaaaaggagaagtt 11546
Query: 229 aatacaatacaatacaatacaatagggcttagaaaatgcaaccctatgagaacaggtgcc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11545 aatacaatacaatacaatacaatagggcttagaaaatgcaaccctatgagaacaggtcca 11486
Query: 289 atttagtttgaatatgggttattactgccttgtgatggaggcataaactgggagaaacct 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11485 atttagtttgaatatgggttattactgccttgtgatggaggcataaactgggagaaacct 11426
Query: 349 ccatttgctggagattttggtgcattgaattgtgcgttcagggcctgccttgagttttca 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11425 ccatttgctggagattttggtgcattgaattgtgcgttcagggcctgccttgagttttca 11366
Query: 409 tggggagcagaatatttctgcgaatattgctgaggaggatattgttgaggtggatactgc 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11365 tggggagcagaatatttctgcgaatattgctgaggaggatattgttgaggtggatactgc 11306
Query: 469 tgaggaagatattgttggtactgttgaccaggtggatgctgctgctggttaggactatgt 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11305 tgaggaagatattgttggtactgttgaccaggtggatgctgctgctggttaggactatgt 11246
Query: 529 ggaaactgctggttgggcattggtctgccaggatttccgtatggattatgcgtacccatt 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11245 ggaaactgctggttgggcattggtctgccaggatttccgtatggattatgcgtacccatt 11186
Query: 589 tgctgtccctgattttgatgtctgtactgttgaggagagatctgctgcagttgcggagga 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11185 tgctgtccctgattttgatgtctgtactgttgaggagagatctgctgcagttgcggagga 11126
Query: 649 cgcttttcatatccctttgaaggtagctgctgtggtgcgttaggcgcccttgagtatcct 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11125 cgcttttcatatccctttgaaggtagctgctgtggtgcgttaggcgcccttgagtatcct 11066
Query: 709 aatccctttggtggaattctttgaggagcagcattaccttgatgaccgtttacgtacccc 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11065 aatccctttggtggaattctttgaggagcagcattaccttgatgaccgtttacgtacccc 11006
Query: 769 gctggaggtgcgttggattgttgtacatagggattttgagtcctaactgctgcagtg 825
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11005 gctggaggtgcgttggattgttgtacatagggattttgagtcctaactgctgcagtg 10949
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5947
Number of Sequences: 1807
Number of extensions: 5947
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 825
length of database: 10,358,551
effective HSP length: 16
effective length of query: 809
effective length of database: 10,329,639
effective search space: 8356677951
effective search space used: 8356677951
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)